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Table 4 Temporal estimates of effective population size (Ne) for Aedes aegypti from Yogyakrta, Indonesia

From: Aedes aegypti has spatially structured and seasonally stable populations in Yogyakarta, Indonesia

Site

6

7

8

Marker type

msats

SNPs

msats

SNPs

msats

SNPs

No. of independent alleles

33

2104

28

2172

28

2286

Harmonic mean sample size

35

8

42

12

34

19

Fs

0.04222

0.16824

0.02079

0.10359

0.03595

0.05988

F

0.01363

0.03676

−0.0032

0.0178

0.00609

0.00684

Ne

367

136

Infinite

281

820

730

95 % CIs for N e

212

128

Infinite

264

449

689

563

144

Infinite

298

1303

773

Jackknife on loci

116

105

964

201

143

483

Infinite

192

Infinite

464

Infinite

1498

  1. Seasonal mosquito larvae were collected from Sites 6, 7 and 8 in Yogyakarta and typed at microsatellites and nuclear genome-wide SNPs with a minimum allele frequency of 5 %