Analysis of Pvama1 genes from China-Myanmar border reveals little regional genetic differentiation of Plasmodium vivax populations

Table 2 Genetic diversity of Pvama1 in eight worldwide populations

Region	Country	n	S	η	k	π ± SD	NS	SP	H	Hd ± SD	GenBank accession numbers
East Asia	China-Myanmar	73	43	46	10.895	0.008 ± 0.000	33	13	41	0.958 ± 0.014	KX495505–KX495577
	Korea	66	56	56	7.620	0.006 ± 0.000	35	21	27	0.950 ± 0.013	KM230319–KM230384
South Asia	India	10	27	25	10.822	0.008 ± 0.001	20	5	7	0.911 ± 0.077	EF025187–195, 197
	Sri Lanka	23	34	32	10.130	0.008 ± 0.000	27	5	15	0.949 ± 0.028	EF218679–EF218701
Southeast Asia	Thailand	231	52	46	11.927	0.009 ± 0.000	34	12	94	0.934 ± 0.012	FJ784891–FJ785121
West Asia	Iran	29	40	43	12.936	0.010 ± 0.000	34	9	29	1.000 ± 0.009	JX624732–JX624760
South America	Venezuela	73	27	25	9.419	0.007 ± 0.000	19	6	18	0.909 ± 0.016	EU346015–EU346087
Oceania	PNG	102	39	38	10.668	0.008 ± 0.000	31	7	83	0.995 ± 0.002	KC702402–KC702503
	Reference strains	8	43	45	15.607	0.012 ± 0.002	36	9	7	0.964 ± 0.077	EU395595–EU395601
Total		615	130	117	13.497	0.010 ± 0.000	79	38	308	0.988 ± 0.002

Abbreviations: n number of samples, S number of polymorphic sites, η the total number of mutations, k the average number of nucleotide differences, π nucleotide diversity, NS number of non-synonymous polymorphisms, SP number of synonymous polymorphisms, H number of haplotypes, Hd haplotype diversity, SD standard deviation

ISSN: 1756-3305