From: Rickettsia parkeri colonization in Amblyomma maculatum: the role of superoxide dismutases
Gene | Accession number | Forward primer 5′-3′ | Reverse primer 5′-3′ | Size (bp) |
---|---|---|---|---|
TrxR | JO843723 | TGTGACTACACCAACGTGCCTACA | AGTAGCCTGCATCCGTTCCTCTTT | 175 |
Catalase | JO843741 | AAAGGACGTCGACATGTTCTGGGA | ACTTGCAGTAGACTGCCTCGTTGT | 173 |
GSHR | JO844062 | ACCTGACCAAGAGCAACGTTGAGA | ATCGCTTGTGATGCCAAACTCTGC | 170 |
MnSOD (SOD3) | JO843979 | GCATCTACTGGACAAACCTCTC | GCAGACATCAGGCCTTTGA | 115 |
Cu/ZnSOD (SOD1) | JO844140 | GGAACCGAAGACAGCAAGAA | GAGAAGAGGCCGATGACAAA | 143 |
Duox | N/A | ATGACGCACAGCCTGTATATT | TGTCCAGAGTGAAGACGATTG | 123 |
16S rRNA | N/A | AGAGTTTGATCCTGGCTCAG | CATGCTGCCTCCCGTAGGAGT | N/A |
Actin | JO842238 | TGGCTCCTTCCACCATGAAGATCA | TAGAAGCACTTGCGGTGCACAATG | 169 |
GAPDH | JO842341 | CACCCATCACAAACATGGGTGCAT | TTTCAGGAAATGAAGCCTGCCAGC | 175 |
OmpB | AF123717 | CAAATGTTGCAGTTCCTCTAAATG | AAAACAAACCGTTAAAACTACCG | 96 |
Probe: 6-FAM-CGCGAAATTAATACCCTTATGAGCAGCAGTCGCG-BHQ-1 | ||||
SelM | JO842653 | ATGATACCTGAATGGCCATCCGCA | TGATCGCGGGTCATCTTCTCCAAA | 171 |
eEFSec (SEF) | KC989559 | TGGCTCCAGAAATGCTGCTCATTG | ACGCCTTTGCGACTCTTCTCCTTA | 157 |
SelS | JO842687 | AGAACAAGTGCACCACAACAGCAG | ATTTCTTGCATCCTTCGACGTGCC | 107 |
SelN | KC989560 | TTAGTTTGGACACTGTGGACGGGT | AGGCTTCTCTAACAACGGCACTCA | 150 |
SelK | JO843326 | AGTTCCAGCAGGTCATCAGTGTCA | TCCAGGAATAGGGCAGTCCATTGT | 132 |
Salp25D | JO843645 | TGCCGCGCTGTCTTTATTATTGGC | AGTTGCACGGAGAACCTCATCGAA | 102 |