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Table 1 List of Sarcoptes scabiei sequences used in this study

From: Are humans the initial source of canine mange?

Haplotype

Sample name

Host

Scientific name

Location

GenBank reference

Reference

1

canis10

Dog

Canis lupus familiaris

Australia

AY493391

[35]

2

canis202

Dog

Canis lupus familiaris

Australia

AY493392

[35]

3

canis22

Dog

Canis lupus familiaris

USA

AY493393

[35]

3

Sc38

Raccoon dog

Nyctereutes procyonoides

Japan

AB821008

[12]

3

Sc24

Raccoon dog

Nyctereutes procyonoides

Japan

AB821006

[12]

3

Sc20

Raccoon dog

Nyctereutes procyonoides

Japan

AB821005

[12]

3

S16

Human

Homo sapiens

France

-a

[32]

3

dog3_china

Dog

Canis lupus familiaris

China

KT961022

This study

3

dog_italy

Dog

Canis lupus familiaris

Italy

KT961025

This study

3

dog1_france

Dog

Canis lupus familiaris

France

KT961029

This study

3

fox1_france

Fox

Vulpes vulpes

France

KT961030

This study

3

fox2_france

Fox

Vulpes vulpes

France

KT961031

This study

3

fox3_france

Fox

Vulpes vulpes

France

KT961032

This study

4

canis19

Dog

Canis lupus familiaris

Australia

AY493394

[35]

5

canis9

Dog

Canis lupus familiaris

USA

AY493395

[35]

6

Sc135

Raccoon dog

Nyctereutes procyonoides

Japan

AB821012

[12]

6

Sc108

Dog

Canislupus familiaris

Japan

AB821011

[12]

6

Sc34

Raccoon dog

Nyctereutes procyonoides

Japan

AB821007

[12]

6

Sc18

Raccoon dog

Nyctereutes procyonoides

Japan

AB821004

[12]

6

dog2ch

Dog

Canis lupus familiaris

China

KJ499544

[33]

7

dog1ch

Dog

Canis lupus familiaris

China

KJ748527

[33]

8

dog3ch

Dog

Canis lupus familiaris

China

KJ499545

[33]

9

dog4ch

Dog

Canis lupus familiaris

China

KJ748529

[33]

10

dog5ch

Dog

Canis lupus familiaris

China

KJ748528

[33]

11

Canis aureus

Jackal

Canis aureus

Israel

KP987792

[36]

11

Vulpes

Fox

Vulpes vulpes

Israel

KP987794

[36]

11

S42

Human

Homo sapiens

France

-b

[32]

12

hominis208

Human

Homo sapiens

Australia

AY493382

[35]

12

S60

Human

Homo sapiens

France

-c

[32]

12

1 M

Human

Homo sapiens

France

-c

[32]

12

2 M

Human

Homo sapiens

France

-c

[32]

12

9 M

Human

Homo sapiens

France

-c

[32]

12

4 M

Human

Homo sapiens

France

-c

[32]

12

5 M

Human

Homo sapiens

France

-c

[32]

12

7 M

Human

Homo sapiens

France

-c

[32]

12

S14

Human

Homo sapiens

France

-c

[32]

12

S45

Human

Homo sapiens

France

-c

[32]

12

S46

Human

Homo sapiens

France

-c

[32]

12

S47

Human

Homo sapiens

France

-c

[32]

12

S48

Human

Homo sapiens

France

-c

[32]

12

S59

Human

Homo sapiens

France

-c

[32]

12

S74

Human

Homo sapiens

France

-c

[32]

13

hominis13

Human

Homo sapiens

Australia

AY493383

[35]

14

hominis14

Human

Homo sapiens

Australia

AY493384

[35]

15

S32

Human

Homo sapiens

France

KR058184

[32]

15

S7

Human

Homo sapiens

France

-d

[32]

15

S9

Human

Homo sapiens

France

-d

[32]

15

10 M

Human

Homo sapiens

France

-d

[32]

15

S12

Human

Homo sapiens

France

-d

[32]

15

S15

Human

Homo sapiens

France

-d

[32]

15

S20

Human

Homo sapiens

France

-d

[32]

15

S21

Human

Homo sapiens

France

-d

[32]

15

S27

Human

Homo sapiens

France

-d

[32]

15

S11

Human

Homo sapiens

France

-d

[32]

15

S25

Human

Homo sapiens

France

-d

[32]

15

S29

Human

Homo sapiens

France

-d

[32]

15

S38

Human

Homo sapiens

France

-d

[32]

15

S40

Human

Homo sapiens

France

-d

[32]

15

S44

Human

Homo sapiens

France

-d

[32]

15

S50

Human

Homo sapiens

France

-d

[32]

15

S51

Human

Homo sapiens

France

-d

[32]

15

S56

Human

Homo sapiens

France

-d

[32]

15

S30

Human

Homo sapiens

France

-d

[32]

15

S34

Human

Homo sapiens

France

-d

[32]

15

S39

Human

Homo sapiens

France

-d

[32]

15

S57

Human

Homo sapiens

France

-d

[32]

15

S8

Human

Homo sapiens

France

-d

[32]

15

13 M

Human

Homo sapiens

France

-d

[32]

15

15 M

Human

Homo sapiens

France

-d

[32]

15

20 M

Human

Homo sapiens

France

-d

[32]

15

S69

Human

Homo sapiens

France

-d

[32]

15

S71

Human

Homo sapiens

France

-d

[32]

16

S58

Human

Homo sapiens

France

KR058186

[32]

17

8 M

Human

Homo sapiens

France

-e

[32]

18

18 M

Human

Homo sapiens

France

KR058187

[32]

19

dog1_china

Dog

Canis lupus familiaris

China

KT961021

This study

19

dog5_china

Dog

Canis lupus familiaris

China

KT961023

This study

20

dog4_china

Dog

Canis lupus familiaris

China

KT961028

This study

20

dog2_france

Dog

Canis lupus familiaris

IDF/France

KT961024

This study

20

dog_SthAfr

Dog

Canis lupus familiaris

South Africa

KT961026

This study

21

dog_thd

Dog

Canis lupus familiaris

Thailand

KT961027

This study

  1. aThis sequence is identical to that of canis22 (AY493393)
  2. bThis sequence is identical to that of waterbuffalo 37025 (AB779588)
  3. cThis sequence is identical to that of hominis205 (AY493382)
  4. dThis sequence is identical to that of S32 (KR058184)
  5. eThis sequence is identical to that of PIG1 (KR058185)