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Table 1 Oligonucleotide primer sequences and PCR reaction conditions for identification of Anopheles species and Wuchereria bancrofti

From: Transmission indices and microfilariae prevalence in human population prior to mass drug administration with ivermectin and albendazole in the Gomoa District of Ghana

Primer for species ID

Sequence 5’  3’

PCR product size (bp)

PCR conditions

Anopheles gambiae s.l. species

Universal primer

GTGTGCCCCTTCCTCGATGT

468

93 °C 3’ followed by 35 cycles (93 °C 30”; 50 °C 30”; 72 °C 1’); 93 °C 30”; 50 °C 30”; 72 °C 10’

Anopheles gambiae s.s.

CTGGTTTGGTCGGCACGTTT

390

Anopheles merus/ melax

TGACCAACCCACTCCCTTGA

464

Anopheles arabiensis

AAGTGTCCTTCTCCATCCTA

315

Anopheles quadrianulatus

CAGACCAAGATGGTTAGTAT

153

Anopheles funestus s.l. species

Universal primer

TGTGAACTGCAGGACACAT

 

30 cycles (94 °C 30”; 40 °C 30”; 72 °C 30”); 72 °C 10’

Anopheles funestus s.s.

GCATCGATGGGTTAATCATG

460

Anopheles vaneedeni

TGTCGACTTGGTAGCCGAAC

555

Anopheles rivulorum

CAAGCCGTTCGACCCTGATT

400

Anopheles parensis

TGCGGTCCCAAGCTAGGTTC

235

Anopheles leesoni

TACACGGGCGCCATGTAGTT

146

Wuchereria bancrofti

NV-1

CGTGATGGCATCAAAGTAGCG

188

94 °C 3’; followed by 35 cycles (94 °C 1’; 55 °C 1’; 72 °C 2’); 94 °C 1’; 55 °C 1’; 72 °C 10”

NV-2

CCCTCACTTACCATAAGACAAC

188