Skip to main content

Table 4 List of enriched pathways functional during different stages of mosquito development

From: Dynamic expression of miRNAs across immature and adult stages of the malaria mosquito Anopheles stephensi

(I)

miRNAs differentially expressed in male and female adult mosquitoes

 

Down-regulated miRNAs in females: miR-2c, miR-285, miR-219, miR-7 and miR-2765

 

Up-regulated miRNAs in females: miR-989

 

Significant clusters identified

Enrichment score

1

Cellular polysaccharide biosynthetic process

2.1

2

Chaperone

1.8

3

Hexose metabolic pathway

1.3

4

Heme binding

1.1

5

Phagocytotic pathways

1.09

(II)

miRNAs regulated from larval to pupa transition of male mosquito

 

Down-regulated miRNAs in pupa male: miR-2c, miR-375, miR-7, miR-1175, miR-263a, miR-1174 and miR-34

 
 

Up-regulated miRNAs in pupa male: miR-100, miR-193, miR-1-3p, miR-1890, miR-277, miR-989 and miR-285

 
 

Significant clusters identified

Enrichment score

1

phagocytosis and membrane organization

2.6

2

polysaccharide metabolic process

2.1

3

protease activity

1.9

4

peptidase activity

1.6

5

nuclear transport

1.1

(III)

miRNAs regulated from transition of pupa to adult male mosquito

 

Down-regulated miRNAs in adult male: miR-2765, miR-193, miR-282, miR-989, miR-2a-5p, miR-9a, miR-1890 and miR-965

 
 

Up-regulated miRNAs in adult male: miR-10-5p, miR-219, miR-2c, miR-210-3p, miR-190-3p, miR-34 and miR-1891

 
 

Significant clusters identified

Enrichment score

1

gelsolin –actin binding protein

2.2

2

polysaccharide biosynthetic process

2

3

zinc finger

1.8

4

vesicle mediated transport

1.7

5

protein biosynthesis

1.6

6

translation

1.5

7

vitamin and cofactor binding

1.4

8

nucleoside binding

1.3

9

protein catabolic process

1.2

10

insect pheromone/odorant binding protein phBP

1.1

(IV)

miRNAs regulated from larval to pupa transition of female mosquito

 

Down-regulated miRNAs in pupa female: miR-7, miR-263a, miR-375, miR-317, miR-34, miR-1174, miR-315 and miR-993-3p

 
 

Up-regulated miRNAs in pupa female : miR-1-3p, miR-let-7, miR-277, miR-133-3p, miR-285, miR-193, miR-998 and miR-184b

 
 

Significant clusters identified

Enrichment score

1

endocytosis

3

2

polysaccharide metabolic process

1.9

3

cell-redox homeostasis

1.7

4

peptidase

1.5

5

amino acid metabolic pathway

1.4

(v)

miRNAs regulated from transition of pupa to adult female mosquito

 

Down-regulated miRNAs in adult female: miR-2765, miR-2c, miR-1-5p, miR-193, miR-282, miR-2944a-5p, miR-285 and miR-9a

 
 

Up-regulated miRNAs in adult female : miR-927-5p, miR-375, miR-980, miR-989, miR-210-3p, miR-317, miR-34 and miR-1891

 
 

Significant clusters identified

Enrichment score

1

phagocytosis

2.4

2

cellular carbohydrate biosynthetic process

2.1

3

protein biosynthesis

1.6

4

vitamin binding

1.5

5

golgi membrane

1.1

6

ATP binding

1.1

7

hydrolase activity

1.1

8

transcription

1.1

  1. These pathways were identified using NIH DAVID functional annotation clustering tool with E score =0.1.