From: Extracellular Onchocerca-derived small RNAs in host nodules and blood
Human serum/plasma | Uninfected serum (European control) | Infected serum (Cameroon) | Uninfected plasma (Ghana) | Infected plasma (Ghana) |
---|---|---|---|---|
Trimmed reads | 25519512 | 23734119 | 24992446 | 10015190 |
Human genome match | 9998552 | 9331113 | 12936180 | 4791645 |
Unambiguous | 9937398 | 9102817 | 12846400 | 4742963 |
rRNA | 15854 | 26512 | 13022 | 6744 |
tRNA | 2568803 | 82382 | 6442858 | 1724586 |
Y RNA | 1149988 | 2408124 | 1004222 | 476464 |
Other Rfam | 198310 | 33516 | 8497 | 3791 |
miRNA | 5589367 | 5924748 | 5266797 | 2472450 |
O. volvulus genome match | 304991 | 583693 | 328590 | 157005 |
Unambiguous | 243837 | 355397 | 238810 | 108323 |
rRNA | 140174 | 108351 | 132900 | 49797 |
tRNA | 358 | 400 | 1884 | 1929 |
Y RNA | 50 | 0 | 0 | 0 |
Other Rfam | 2434 | 2712 | 3013 | 688 |
miRNA | 0 | 75 | 344 | 743 |