Skip to main content

Table 7 The 50 most abundant SAGE tags in the pooled tag data from Infected LongSAGE library

From: The ovarian transcriptome of the cattle tick, Rhipicephalus (Boophilus) microplus, feeding upon a bovine host infected with Babesia bovis

Rank

Taga

Count

Control

BmiGI match

   

Library rank

Description

Species

e-value

ID

1

ATCTGAGTTTAGACCGA

339

25

Mitochondrial DNA

Rhipicephalus sanguineus

0.00

TC5761

2

TGATTGTGTGCTATGTG

142

783

-

-

-

 

3

GGGGCAAACACTATGGA

85

Nob

-

-

-

 

4

AAGATCACACTGGCATT

57

783

-

-

-

 

5

TTTTCCCCAACCCAGGA

50

No

Microplusin

R. microplus

7e-49

BEACP61TR

6

CAGGCTGTCCCAGCAAT

43

267

Secreted salivary gland peptide

I. scapularis

1e-05

BEAE009TR

7

TTTTTCCCAACCCAGGA

39

783

-

-

-

 

8

GGTCAAGGGGTAATAAA

37

No

-

-

-

 

9

GTGGTTACGGAGGCGGG

36

No

-

-

-

 

10

GACGGCCCTTGCAAGTG

33

128

-

-

-

 

11

CAGAAGCTTCAAAGCCA

33

783

-

-

-

 

12

TCGACAGGGTCATTCCG

31

No

-

-

-

 

13

GCCGTTCTTAGTTGGTG

28

783

-

-

-

 

14

TGGTGGTAGCTGGTGCG

25

49

-

-

-

 

15

GCGGTTACGGAAGCGGG

25

No

-

-

-

 

16

CAGTTGTTGTTGCAGGG

24

77

-

-

-

 

17

AAGATCACGCTGGCATT

24

No

-

-

-

 

18

GTAGCCGCCAGCCAAGG

22

387

-

-

-

 

19

TGGCTGGCTGCCCACTG

22

3

Ribosomal protein P0

Haemaphysalis longicornis

2e-36

TC9039

20

GTAGGCCCGGTATTGGT

22

33

-

-

-

 

21

CACATCATAGAACAGCT

21

No

-

-

-

 

22

CTGTCCAATAAATGTCC

21

195

H3 Histone -

Canis familiaris

1e-68

TC12182

23

GAAATAAATGCTGCCCT

21

No

-

-

-

 

24

ACAAATAAAATTGAGCT

21

No

-

-

-

 

25

CTTACTGCCCCAGCAAT

20

387

Secreted salivary gland peptide

I. scapularis

9e-15

TC8005

26

GTGGGCTTCGGGGTCGC

20

157

-

-

-

 

27

GACTCCAATGAAGGCCC

20

18

Alpha tubulin

Mus musculus

0.0

TC9399

28

TTGAGAGGTGGACAGGT

19

53

-

-

-

 

29

ACGCGACTGTCGCCACC

18

6

Secreted protein

I. scapularis

3e-72

TC5798

30

ACGTGACTGTCGCCACC

18

1

-

-

-

 

31

GGTCCACCCCAGCGACT

17

10

Ribosomal protein L10A

I. scapularis

8e-104

TC12372

32

TACTGTACCGAGGCCAG

17

No

-

-

-

 

33

GTTGTTACGGGTAACGG

17

No

Secreted protein

I. scapularis

6e-20

BEAE880TF

34

ATATTGACATTTCGTAG

17

No

Mitochondrial DNA

R. sanguineus

0.0

TC12054

35

GCGAGGAGCTTGTCGGG

16

20

-

-

-

 

36

AAAAAGGCTCAAGAAAT

15

783

-

-

-

 

37

GGACTCTGTAAGCACCG

15

53

-

-

-

 

38

CCGGTTCTTTCTTGGTG

15

No

-

-

-

 

39

GGCGGAATAAAAGCGGT

14

60

60S ribosomal protein L5

I. scapularis

4e-146

TC8903

40

ATCTGAGTTTAAACCGA

14

No

-

-

-

 

41

CCTCCAACGTACTCCGG

14

783

Hypothetical protein

I. scapularis

8e-15

TC11473

42

GCACGGCGATGCGACGG

14

16

-

-

-

 

43

GGTCAGTCGGTCCTTAG

13

783

10kD secreted protein

A. monolakensis

5e-28

TC12507

44

TAGGAATTTAAAAGTTG

13

No

Mitochondrial DNA

R. sanguineus

0.0

TC5761

45

CTCACCGACCCGTCGGC

13

8

-

-

-

 

46

CCGAAATAAGGCGAAAC

13

No

-

-

-

 

47

ACCAGTTCAGGAGAGCC

13

65

-

-

-

 

48

CCCGGCCACAACCAGGA

13

100

Hypothetical protein

I. scapularis

5e-68

TC10088

49

TACGAAGCGCTGGCAGA

12

5

Disulfide isomerase

Haemaphysalis longicornis

4e-48

TC8716

50

GGATTTGGTCTCTTTGA

11

783

60S acidic ribosomal protein P1

I. scapularis

1e-29

TC13709

  1. a CATG trimmed from each tag’s 5′ end for clarity.
  2. b Indicates tag not found in Control library.