Figure 2

Amino acid alignment of Yeerongpilly (Australian strain), Cuban Camcord (Cuban strain used in Gavac vaccine). Linear B-cell epitopes previously identified by Odongo et al. are boxed; synthetic immunogenic peptides previously identified by Patarroyo et al. are underlined; antigenic peptides predicted using the method of Kolaskar and Tongaonkar (Canales 2009) are in grey font; hydrophilic regions (identified using Hopp & Woods algorithm in BioEdit sequence alignment editor; window size of 5) of south Texas isolates not found in Yeerongpilly or Camcord isolates are shaded.